Introduction | Installation | Simulating Single-Cell Multi-Omics Data | Data Preparation | Providing Custom Data | Running the Simulation: sc_mosim | Default sc_mosim Simulation | Customizing the sc_mosim Simulation | Working with Simulation Results | The sc_mosim Simulation Object | Retrieving Simulation Settings | Accessing the Count Data Matrices | How to cite MOSim

mosim | Abstract | Introduction | Getting started | MOSim input parameters | Running the simulation: | Provided STATegra dataset | Providing custom data: omicData | Changing omic settings: omicSim | Working with simulation results | The simulation object | Retrieving the simulation settings: omicSettings | Accessing the count data matrices: omicResults | Obtaining the experimental design matrix: experimentalDesign | Plotting results: plotProfile | Advanced use cases | Negative binomial variance | Transforming regulator data to 1/0 format | Special simulation case: Transcription Factors | How to cite MOSim